diff --git a/opencompass/configs/datasets/SeedBench/README.md b/opencompass/configs/datasets/SeedBench/README.md new file mode 100644 index 00000000..c78f852a --- /dev/null +++ b/opencompass/configs/datasets/SeedBench/README.md @@ -0,0 +1,79 @@ +## 🌾 About SeedBench + +**SeedBench** is the first multi-task benchmark designed to evaluate large language models (LLMs) in seed science, focusing on seed breeding. This repository includes the dataset, evaluation code, and documentation to support research in this domain. + +SeedBench assesses LLMs across three core seed breeding stages: +- **Gene Information Retrieval** +- **Gene Function and Regulation Analysis** +- **Variety Breeding with Agronomic Trait Optimization** + +Built with domain experts, SeedBench features **2,264 expert-validated questions** across 11 task types and 10 subcategories, initially targeting rice breeding. Future updates will include other crops like maize, soybean, and wheat. + +--- + +## 🔎 Dataset Details + +- **Corpus**: 308,727 publications cleaned to 1.1 billion tokens; 279 segments from 113 documents. +- **Questions**: 2,264 across 11 task types, bilingual (English/Chinese), expert-validated. +- **Focus**: Rice breeding as a representative case. + + **Types and metrics:** + + +
+ + | Type ID | Question Type | Metric | Count | + |---------|----------------------------|----------|-------| + | **Q&A** | | | | + | QA-1 | Multiple Choice | Accuracy | 200 | + | QA-2 | Multiple Answer | Macro-F1 | 187 | + | QA-3 | Fill-in-the-Blank | ROUGE-L | 224 | + | QA-4 | Generation | ROUGE-L | 242 | + | **Summarization** | | | | + | SUM-1 | Simple Summarization | ROUGE-L | 225 | + | SUM-2 | Key Information Extraction | ROUGE-L | 225 | + | **Reading Comprehension** | | | | + | RC-1 | Multiple Choice | Accuracy | 113 | + | RC-2 | Multiple Answer | Macro-F1 | 108 | + | RC-3 | Fill-in-the-Blank | ROUGE-L | 221 | + | RC-4 | Generation | ROUGE-L | 240 | + | RC-5 | Subcategory Classification | Accuracy | 279 | + +
+ + +--- + +## 📂 Dataset Links + +- [SeedBench on Github](https://github.com/open-sciencelab/SeedBench) +- [SeedBench on Hugging Face](https://huggingface.co/datasets/yj12869741/SeedBench) +- [SeedBench on ModelScope](https://www.modelscope.cn/datasets/y12869741/SeedBench/summary) + +--- + +## ☀️ Key Results + +We evaluated 26 LLMs, including proprietary, open-source, and domain-specific models. Highlights: + +### Performance by Question Type + +- **Top Performers**: DeepSeek-V3 (68.37), GPT-4 (67.88). + +### Performance by Task Types + +| Model | QA-1 | QA-2 | QA-3 | QA-4 | SUM-1 | SUM-2 | RC-1 | RC-2 | RC-3 | RC-4 | RC-5 | Avg | +|------------------|------|------|------|------|-------|-------|------|------|------|------|------|------| +| GPT-4 | 60.50| 73.87| 21.35| 36.07| 58.73 | 62.89 | 100.00| 96.44| 87.86| 62.29| 86.74| 67.88| +| DeepSeek-V3 | 72.50| 79.84| 29.29| 40.63| 48.06 | 54.67 | 100.00| 97.22| 87.89| 55.19| 86.74| 68.37| +| Qwen2-72B | 59.50| 75.98| 19.55| 31.62| 31.08 | 63.09 | 99.12 | 94.24| 72.20| 51.58| 89.96| 62.54| + +### Performance by Subcategory + +| Model | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 | Avg | +|-------------------|------|------|------|------|------|------|------|------|------|------|------| +| GPT-4 | 59.59| 60.55| 76.32| 61.16| 56.34| 59.35| 63.67| 64.74| 60.65| 67.66| 62.06| +| DeepSeek-V3-671B | 56.03| 62.42| 74.81| 63.17| 55.23| 58.84| 68.23| 69.04| 66.46| 68.48| 63.30| +| Qwen2-72B | 51.16| 58.10| 74.07| 59.72| 51.58| 57.76| 58.85| 61.63| 56.69| 59.11| 57.62| + +- **Top Performers**: DeepSeek-V3-671B (63.30), GPT-4 (62.06). \ No newline at end of file diff --git a/opencompass/datasets/SeedBench.py b/opencompass/datasets/SeedBench.py index fa8bd962..f7c97b5d 100644 --- a/opencompass/datasets/SeedBench.py +++ b/opencompass/datasets/SeedBench.py @@ -121,6 +121,7 @@ class F1Evaluator(BaseEvaluator): random.setstate(random_state) np.random.set_state(np_random_state) return self._postprocess(result) + @ICL_EVALUATORS.register_module() class F1ScoreEvaluator(F1Evaluator): diff --git a/opencompass/utils/datasets_info.py b/opencompass/utils/datasets_info.py index 00db25e8..a6059e40 100644 --- a/opencompass/utils/datasets_info.py +++ b/opencompass/utils/datasets_info.py @@ -229,6 +229,12 @@ DATASETS_MAPPING = { "hf_id": "opencompass/race", "local": "./data/race/", }, + # SeedBench + "opencompass/seedbench": { + "ms_id": "", + "hf_id": "y12869741/SeedBench", + "local": "./data/SeedBench", + }, # SIQA "opencompass/siqa": { "ms_id": "opencompass/siqa",