update

opencompass/configs/datasets/nejm_ai_benchmark/nejmaibench_llmjudge_gen_60c8f5.py

@@ -1,7 +1,8 @@
-from opencompass.datasets import NejmaibenchDataset, nejmaibench_llmjudge_postprocess
+from opencompass.datasets import NejmaibenchDataset
 from opencompass.openicl.icl_inferencer import GenInferencer
 from opencompass.openicl.icl_prompt_template import PromptTemplate
 from opencompass.openicl.icl_retriever import ZeroRetriever
+from opencompass.datasets import generic_llmjudge_postprocess
 from opencompass.evaluator import GenericLLMEvaluator
 import os
 
@@ -88,7 +89,7 @@ eval_cfg = dict(
             reader_cfg=reader_cfg,
         ),
         judge_cfg=dict(),
-        dict_postprocessor=dict(type=nejmaibench_llmjudge_postprocess),
+        dict_postprocessor=dict(type=generic_llmjudge_postprocess),
     ),
 )
 

opencompass/datasets/nejmaibench.py

@@ -5,7 +5,7 @@ from datasets import Dataset
 
 from opencompass.openicl import BaseEvaluator
 from opencompass.registry import LOAD_DATASET, TEXT_POSTPROCESSORS
-from opencompass.utils import get_data_path, get_logger
+from opencompass.utils import get_data_path
 
 from .base import BaseDataset
 
@@ -137,116 +137,3 @@ def answer_cleansing(
                 prediction[0] = prediction[0][:-1]
 
         return prediction[0]
-
-
-def _generic_llmjudge_postprocess(judgement: str):
-    match = re.search(r'(A|B)', judgement)
-    grade_letter = (match.group(0) if match else 'B'
-                    )  # Default to "INCORRECT" if no match
-    return grade_letter
-
-
-def nejmaibench_llmjudge_postprocess(
-    output: dict,
-    output_path: str,
-    dataset: Dataset,
-) -> dict:
-    # Get the original dataset
-    original_dataset = dataset.reader.dataset['test']
-
-    judged_answers = []
-    original_responses = []
-    references = []
-    details = []
-
-    # Initialize statistics dictionaries
-    stats = {'Subject': {}}
-
-    total_correct = 0
-    total_count = 0
-
-    # Process each sample
-    for k, v in output.items():
-        idx = int(k)  # Convert key to integer for indexing
-        original_responses.append(v['prediction'])
-
-        processed_judge = _generic_llmjudge_postprocess(v['prediction'])
-
-        # Get category information from the dataset
-        sample = original_dataset[idx]
-        subject = sample.get('Subject', 'unknown')
-
-        # Initialize category stats if not exists
-        for level, key in [
-            ('Subject', subject),
-        ]:
-            if key not in stats[level]:
-                stats[level][key] = {'correct': 0, 'total': 0}
-
-        # Record the judgment
-        if processed_judge is not None:
-            judged_answers.append(processed_judge)
-            try:
-                gold = v['gold']
-                references.append(gold)
-            except KeyError:
-                get_logger().warning(
-                    f'No gold answer for {k}, use empty string as reference!')
-                gold = ''
-                references.append('')
-
-            # Check if the answer is correct (A means correct)
-            is_correct = processed_judge == 'A'
-            total_count += 1
-
-            if is_correct:
-                total_correct += 1
-                # Update category stats
-                for level, key in [
-                    ('Subject', subject),
-                ]:
-                    stats[level][key]['correct'] += 1
-
-            # Update category totals
-            for level, key in [
-                ('Subject', subject),
-            ]:
-                stats[level][key]['total'] += 1
-            # Add to details
-            details.append({
-                'id': k,
-                'question': sample['question'],
-                'options': sample['options'],
-                'origin_prompt': v['origin_prompt'],
-                'llm_judge': processed_judge,
-                'gold': gold,
-                'is_correct': is_correct,
-                'Subject': subject,
-            })
-
-    # Calculate overall accuracy with two decimal places
-    overall_accuracy = (round(
-        (total_correct / total_count * 100), 2) if total_count > 0 else 0.00)
-
-    # Initialize results dictionary
-    results = {
-        'accuracy': overall_accuracy,
-        'total_correct': total_correct,
-        'total_count': total_count,
-        'details': details,
-    }
-
-    # Calculate accuracy for each category and flatten into results
-    for level in stats:
-        for key, value in stats[level].items():
-            if value['total'] > 0:
-                # Calculate accuracy with two decimal places
-                accuracy = round((value['correct'] / value['total'] * 100), 2)
-
-                # Create a flattened key for the category
-                flat_key = f'nejmaibench-{key}'
-
-                # Add to results
-                results[flat_key] = accuracy
-
-    return results

opencompass/utils/datasets_info.py

@@ -448,8 +448,8 @@ DATASETS_MAPPING = {
     },
     "opencompass/nejmaibench": {
         "ms_id": "",
-        "hf_id": "SeanWu25/NEJM-AI_Benchmarking_Medical_Language_Models",
+        "hf_id": "",
-        "local": "./opencompass/configs/datasets/nejm_ai_benchmark/data/NEJM_All_Questions_And_Answers.csv",
+        "local": "./data/nejmaibench/NEJM_All_Questions_And_Answers.csv",
     },
 
 }
@@ -803,6 +803,11 @@ DATASETS_URL = {
         "url":
         "http://opencompass.oss-cn-shanghai.aliyuncs.com/datasets/data/ChemBench4K.zip",
         "md5": "fc23fd21b2566a5dbbebfa4601d7779c"
+    },
+    "nejmaibench": {
+        "url":
+        "http://opencompass.oss-cn-shanghai.aliyuncs.com/datasets/data/nejmaibench.zip",
+        "md5": "e6082cae3596b3ebea73e23ba445b99e"
     }
     
 }